estExt_fgenesh1_pm.C_120035 (Schizophyllum commune)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_fgenesh1_pm.C_120035 T05029_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_120035 CCCH ZF 93 118
estExt_fgenesh1_pm.C_120035 CCCH ZF 178 198

Links

Other CCCH ZF family RBPs
Other Schizophyllum commune RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.809
AGAP008634 Anopheles gambiae AGAP008634 N 0.702
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.766
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.766
GF12572 Drosophila ananassae FBgn0089609 N 0.723
GG10627 Drosophila erecta FBgn0102935 N 0.702
GH21804 Drosophila grimshawi FBgn0129265 N 0.723
CG8635 Drosophila melanogaster FBgn0033317 N 0.702
GI20775 Drosophila mojavensis FBgn0143510 N 0.723
GL11672 Drosophila persimilis FBgn0149281 N 0.723
GA21225-RA Drosophila pseudoobscura FBgn0081213 N 0.723
GM20672 Drosophila sechellia FBgn0175554 N 0.702
GJ20510 Drosophila virilis FBgn0207650 N 0.723
GE22859 Drosophila yakuba FBgn0240063 N 0.702
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.745
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.872
EEB90926.1 Moniliophthora perniciosa EEB90926.1 N 0.745
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.851
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.702
RO3G_08915 Rhizopus oryzae RO3G_08915 N 0.750
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.723
Smp_099900 Schistosoma mansoni Smp_099900 N 0.702
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.830
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.723
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.723