GA21225-RA (Drosophila pseudoobscura)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 FBgn0081213 T03689_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0276162 CCCH ZF 95 120
FBpp0276162 CCCH ZF 182 200

Links

Other CCCH ZF family RBPs
Other Drosophila pseudoobscura RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GL11672 Drosophila persimilis FBgn0149281 N 1.000
GH21804 Drosophila grimshawi FBgn0129265 N 1.000
GF12572 Drosophila ananassae FBgn0089609 N 0.978
GI20775 Drosophila mojavensis FBgn0143510 N 0.978
GJ20510 Drosophila virilis FBgn0207650 N 0.978
CG8635 Drosophila melanogaster FBgn0033317 N 0.956
GE22859 Drosophila yakuba FBgn0240063 N 0.956
GM20672 Drosophila sechellia FBgn0175554 N 0.956
GG10627 Drosophila erecta FBgn0102935 N 0.956
AAEL010535 Aedes aegypti AAEL010535 N 0.889
AGAP008634 Anopheles gambiae AGAP008634 N 0.889
fgenesh2_pg.scaffold_616000019 Branchiostoma floridae fgenesh2_pg.scaffold_616000019 N 0.872
Smp_099900 Schistosoma mansoni Smp_099900 N 0.809
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.809
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.787
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.787
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.766
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.723
e_gw1.132.32.1 Postia placenta e_gw1.132.32.1 N 0.723
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.723
estExt_fgenesh1_pm.C_120035 Schizophyllum commune estExt_fgenesh1_pm.C_120035 N 0.723
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.723
Cd36_81440 Candida dubliniensis Cd36_81440 N 0.708
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.702
e_gwh1.21.47.1 Laccaria bicolor e_gwh1.21.47.1 N 0.702
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.702