AAH75189 (Xenopus laevis)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		AAH75189 T07733_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZCRB1
M085_0.6 		Homo sapiens GRHUUAA RNAcompete
Ray et al.(2013)
RNCMPT00087 		0.854
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH75189 RRM 12 82
AAH75189 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Xenopus laevis RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_10951 Chaetomium globosum CHGG_10951 N 0.000
GLRG_10685 Colletotrichum graminicola GLRG_10685 N 0.000
FVEG_05822 Fusarium verticillioides FVEG_05822 N 0.000
MGG_01978 Magnaporthe oryzae MGG_01978 N 0.000
estExt_Genewise1Plus.C_60855 Myceliophthora thermophila estExt_Genewise1Plus.C_60855 N 0.000
NCU02208 Neurospora crassa NCU02208 N 0.000
estExt_fgenesh3_kg.C_90117 Neurospora discreta estExt_fgenesh3_kg.C_90117 N 0.000
estExt_fgenesh2_kg.C_80085 Neurospora tetrasperma estExt_fgenesh2_kg.C_80085 N 0.000
estExt_genemark.C_70730 Thielavia terrestris estExt_genemark.C_70730 N 0.000
estExt_fgenesh1_pm.C_30019 Trichoderma reesei estExt_fgenesh1_pm.C_30019 N 0.000
estExt_Genewise1.C_130084 Trichoderma virens estExt_Genewise1.C_130084 N 0.000