CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DDX41
(
Gorilla gorilla
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSGGOG00000014484
T10231_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000014136
CCHC ZF
580
597
RGCAFCGGLGHRITDCPK
Links
Other
CCHC ZF
family RBPs
Other
Gorilla gorilla
RBPs
78 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100408015
Callithrix jacchus
ENSCJAG00000001903
I
0.000
PCBP3
Homo sapiens
ENSG00000183570
I
0.000
ENSMGAG00000005386
Meleagris gallopavo
ENSMGAG00000005386
N
0.000
XR_030450.1
Monodelphis domestica
ENSMODG00000016543
N
0.000
ENSMODG00000017748
Monodelphis domestica
ENSMODG00000017748
I
0.000
PCBP2
Sus scrofa
ENSSSCG00000000274
I
0.000
PCBP1
Tarsius syrichta
ENSTSYG00000011282
N
0.000
PCBP1
Tupaia belangeri
ENSTBEG00000015706
N
0.000