CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CG5516
(
Drosophila melanogaster
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
FBgn0038389
T10619_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0082666
CCHC ZF
28
45
IRCQKCLQIGHWSYECKE
FBpp0291705
CCHC ZF
28
45
IRCQKCLQIGHWSYECKE
Links
Other
CCHC ZF
family RBPs
Other
Drosophila melanogaster
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Aqu1.220260
Amphimedon queenslandica
Aqu1.220260
N
0.000
fgenesh2_pg.scaffold_81000029
Branchiostoma floridae
fgenesh2_pg.scaffold_81000029
N
0.000