Aqu1.220260 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.220260 T13298_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.220260 CCHC ZF 172 189

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Aqu1.214624 Amphimedon queenslandica Aqu1.214624 N 0.778
Aqu1.201808 Amphimedon queenslandica Aqu1.201808 N 0.722
LOC_Os10g20570 Oryza sativa LOC_Os10g20570 N 0.722
LOC_Os07g20810 Oryza sativa LOC_Os07g20810 N 0.722
fgenesh2_pg.scaffold_902000002 Branchiostoma floridae fgenesh2_pg.scaffold_902000002 N 0.722