LOC_Os05g17540 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g17540 T11421_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g17540.1 CCHC ZF 220 237

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g24400 Oryza sativa LOC_Os01g24400 N 0.833
LOC_Os06g39920 Oryza sativa LOC_Os06g39920 N 1.000
LOC_Os07g19200 Oryza sativa LOC_Os07g19200 N 0.944
LOC_Os07g20560 Oryza sativa LOC_Os07g20560 N 1.000
LOC_Os07g23220 Oryza sativa LOC_Os07g23220 N 1.000
LOC_Os09g07850 Oryza sativa LOC_Os09g07850 N 1.000
LOC_Os10g01600 Oryza sativa LOC_Os10g01600 N 0.944
LOC_Os10g03070 Oryza sativa LOC_Os10g03070 N 1.000
LOC_Os10g13410 Oryza sativa LOC_Os10g13410 N 1.000
LOC_Os10g20660 Oryza sativa LOC_Os10g20660 N 1.000
LOC_Os10g22230 Oryza sativa LOC_Os10g22230 N 1.000
LOC_Os10g32124 Oryza sativa LOC_Os10g32124 N 0.944
LOC_Os12g12450 Oryza sativa LOC_Os12g12450 N 1.000
LOC_Os12g15580 Oryza sativa LOC_Os12g15580 N 0.889
LOC_Os12g22180 Oryza sativa LOC_Os12g22180 N 1.000
LOC_Os12g29900 Oryza sativa LOC_Os12g29900 N 1.000
LOC_Os06g11460 Oryza sativa LOC_Os06g11460 N 0.889
LOC_Os05g44870 Oryza sativa LOC_Os05g44870 N 0.944
LOC_Os01g27550 Oryza sativa LOC_Os01g27550 N 1.000
LOC_Os01g61490 Oryza sativa LOC_Os01g61490 N 1.000
LOC_Os02g10270 Oryza sativa LOC_Os02g10270 N 1.000
LOC_Os02g13750 Oryza sativa LOC_Os02g13750 N 0.889
LOC_Os02g29260 Oryza sativa LOC_Os02g29260 N 1.000
LOC_Os02g34350 Oryza sativa LOC_Os02g34350 N 1.000
LOC_Os02g45680 Oryza sativa LOC_Os02g45680 N 0.889
LOC_Os03g32600 Oryza sativa LOC_Os03g32600 N 1.000
LOC_Os04g01439 Oryza sativa LOC_Os04g01439 N 0.944
LOC_Os04g20840 Oryza sativa LOC_Os04g20840 N 0.778
LOC_Os04g26290 Oryza sativa LOC_Os04g26290 N 1.000
LOC_Os04g32750 Oryza sativa LOC_Os04g32750 N 1.000
LOC_Os05g02270 Oryza sativa LOC_Os05g02270 N 1.000
LOC_Os05g13730 Oryza sativa LOC_Os05g13730 N 1.000
LOC_Os05g19550 Oryza sativa LOC_Os05g19550 N 1.000
LOC_Os12g37810 Oryza sativa LOC_Os12g37810 N 0.944