s_439641 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_439641 T14734_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_439641 CCHC ZF 249 266

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_117000017 Phytophthora ramorum fgenesh1_pg.C_scaffold_117000017 N 0.722
fgenesh1_pg.C_scaffold_73000019 Phytophthora ramorum fgenesh1_pg.C_scaffold_73000019 N 0.722
fgenesh1_pg.C_scaffold_34000074 Phytophthora ramorum fgenesh1_pg.C_scaffold_34000074 N 0.778
fgenesh1_pg.C_scaffold_30000027 Phytophthora ramorum fgenesh1_pg.C_scaffold_30000027 N 0.722
fgenesh1_pg.C_scaffold_280000003 Phytophthora ramorum fgenesh1_pg.C_scaffold_280000003 N 0.778
fgenesh1_pg.C_scaffold_192000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_192000001 N 0.778
fgenesh1_pg.C_scaffold_143000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_143000002 N 0.778
s_443729 Phytophthora sojae s_443729 N 0.778
s_445492 Phytophthora sojae s_445492 N 0.722
s_448013 Phytophthora sojae s_448013 N 0.778
s_469343 Phytophthora sojae s_469343 N 0.722