s_445492 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_445492 T14756_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_445492 CCHC ZF 210 227

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_469343 Phytophthora sojae s_469343 N 1.000
s_443729 Phytophthora sojae s_443729 N 0.944
s_448013 Phytophthora sojae s_448013 N 0.889
fgenesh1_pg.C_scaffold_143000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_143000002 N 0.722
fgenesh1_pg.C_scaffold_192000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_192000001 N 0.722
fgenesh1_pg.C_scaffold_34000074 Phytophthora ramorum fgenesh1_pg.C_scaffold_34000074 N 0.722
s_439641 Phytophthora sojae s_439641 N 0.722
s_516721 Phytophthora sojae s_516721 N 0.722
fgenesh1_pg.C_scaffold_280000003 Phytophthora ramorum fgenesh1_pg.C_scaffold_280000003 N 0.722
s_459702 Phytophthora sojae s_459702 N 0.722
s_449006 Phytophthora sojae s_449006 N 0.722
s_447095 Phytophthora sojae s_447095 N 0.722
s_450619 Phytophthora sojae s_450619 N 0.722
s_450716 Phytophthora sojae s_450716 N 0.722
s_451625 Phytophthora sojae s_451625 N 0.722
s_446259 Phytophthora sojae s_446259 N 0.722