CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.2747_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.2747_g
T15718_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.2747_g
CCHC ZF
59
76
GNCYNCGQEGHMSQDCRR
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MDP0000183174
Malus x domestica
MDP0000183174
N
0.000
MDP0000234284
Malus x domestica
MDP0000234284
N
0.000
MDP0000441109
Malus x domestica
MDP0000441109
N
0.000
GRMZM2G014400
Zea mays
GRMZM2G014400
N
0.000