GRMZM2G014400 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G014400 T54007_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G014400_P01 RRM 8 76
GRMZM2G014400_P01 RRM 107 176
GRMZM2G014400_P02 RRM 8 75

Links

Other RRM family RBPs
Other Zea mays RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB02G037690 Sorghum bicolor Sb02g037690 N 0.986
GRMZM2G022313 Zea mays GRMZM2G022313 N 0.971
BGIOSIBCE025402 Oryza indica BGIOSIBCE025402 N 0.964
LOC_Os07g39560 Oryza sativa LOC_Os07g39560 N 0.957
BRADI1G23280 Brachypodium distachyon BRADI1G23280 N 0.942
GRMZM2G144890 Zea mays GRMZM2G144890 N 0.921
GRMZM2G162954 Zea mays GRMZM2G162954 N 0.921
SB02G005620 Sorghum bicolor Sb02g005620 N 0.914
SB02G005670 Sorghum bicolor Sb02g005670 N 0.914
GRMZM2G013065 Zea mays GRMZM2G013065 N 0.899
LOC_Os11g41890 Oryza sativa LOC_Os11g41890 N 0.843
BRADI4G12200 Brachypodium distachyon BRADI4G12200 N 0.829
B9HCV4_POPTR Populus trichocarpa POPTR_0006s01680 N 0.820
29608.m000212 Ricinus communis 29608.m000212 N 0.820
30048.m000319 Ricinus communis 30048.m000319 N 0.820
PK25912.1 Cannabis sativa PK25912.1 N 0.813
PK13457.1 Cannabis sativa PK13457.1 N 0.813
cassava12078.valid.m1 Manihot esculenta cassava12078.valid.m1 N 0.813
cassava865.valid.m1 Manihot esculenta cassava865.valid.m1 N 0.813
cassava12077.valid.m1 Manihot esculenta cassava12077.valid.m1 N 0.813
mgf009385m Mimulus guttatus mgf009385m N 0.813
Medtr2g030270 Medicago truncatula Medtr2g030270 N 0.813
27613.m000635 Ricinus communis 27613.m000635 N 0.806
cassava31392.valid.m1 Manihot esculenta cassava31392.valid.m1 N 0.806
B9I165_POPTR Populus trichocarpa POPTR_0011s09050 N 0.806
POPTR_0016s01150 Populus trichocarpa POPTR_0016s01150 N 0.806
B9GTG8_POPTR Populus trichocarpa POPTR_0002s22120 N 0.799
B9GJW8_POPTR Populus trichocarpa POPTR_0001s37230 N 0.799
GSVIVG00037771001 Vitis vinifera GSVIVG00037771001 N 0.799
Cucsa.042370 Cucumis sativus Cucsa.042370 N 0.799
ppa005132m Prunus persica ppa005132m N 0.799
ppa005119m Prunus persica ppa005119m N 0.799
cassava23136.valid.m1 Manihot esculenta cassava23136.valid.m1 N 0.799
ppa004834m Prunus persica ppa004834m N 0.791
Glyma14g00970.1 Glycine max Glyma14g00970.1 N 0.791
mgf012147m Mimulus guttatus mgf012147m N 0.791
Cucsa.120420 Cucumis sativus Cucsa.120420 N 0.791
MDP0000204698 Malus x domestica MDP0000204698 N 0.791
MDP0000320618 Malus x domestica MDP0000320618 N 0.791
ppa005122m Prunus persica ppa005122m N 0.791
MDP0000907782 Malus x domestica MDP0000907782 N 0.791
Glyma02g47690.1 Glycine max Glyma02g47690.1 N 0.784
GSVIVG00030040001 Vitis vinifera GSVIVG00030040001 N 0.784
MDP0000642684 Malus x domestica MDP0000642684 N 0.784
MDP0000609551 Malus x domestica MDP0000609551 N 0.784
XM_002863283.1 Arabidopsis lyrata Al_scaffold_0008_26 N 0.784
MDP0000188788 Malus x domestica MDP0000188788 N 0.784
mgf004139m Mimulus guttatus mgf004139m N 0.777
Glyma02g46650.1 Glycine max Glyma02g46650.1 N 0.777
Glyma18g09090.1 Glycine max Glyma18g09090.1 N 0.777
Cucsa.180480 Cucumis sativus Cucsa.180480 N 0.770
chr6.LjT16B20.40.nc Lotus japonicus chr6.LjT16B20.40.nc N 0.770
Glyma14g02020.1 Glycine max Glyma14g02020.1 N 0.770
Medtr5g105300 Medicago truncatula Medtr5g105300 N 0.770
Glyma08g43740.1 Glycine max Glyma08g43740.1 N 0.770
XM_002862650.1 Arabidopsis lyrata fgenesh2_kg.8__1457__AT5G55550.1 N 0.770
AT4G26650 Arabidopsis thaliana AT4G26650-TAIR-G N 0.770
XM_002869554.1 Arabidopsis lyrata fgenesh2_kg.7__1574__AT4G26650.1 N 0.770
cassava10847.m1 Manihot esculenta cassava10847.m1 N 0.770
AT5G47620 Arabidopsis thaliana AT5G47620-TAIR-G N 0.770
B9IAN1_POPTR Populus trichocarpa POPTR_0014s15970 N 0.766
chr2.LjT48A12.20.nd Lotus japonicus chr2.LjT48A12.20.nd N 0.764
XM_002882506.1 Arabidopsis lyrata fgenesh2_kg.3__820__AT3G07810.2 N 0.763
Medtr3g076980 Medicago truncatula Medtr3g076980 N 0.763
chr6.LjT11E14.110.nc Lotus japonicus chr6.LjT11E14.110.nc N 0.763
AT3G07810 Arabidopsis thaliana AT3G07810-TAIR-G N 0.763
AT5G55550 Arabidopsis thaliana AT5G55550-TAIR-G N 0.763
mgf009486m Mimulus guttatus mgf009486m N 0.750
chr2.LjT48A12.190.nd Lotus japonicus chr2.LjT48A12.190.nd N 0.748
MDP0000183174 Malus x domestica MDP0000183174 N 0.735
MDP0000122783 Malus x domestica MDP0000122783 N 0.721
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.719
MDP0000441109 Malus x domestica MDP0000441109 N 0.710
e_gw1.24.298.1 Selaginella moellendorfii e_gw1.24.298.1 N 0.705
Medtr4g155980 Medicago truncatula Medtr4g155980 N 0.705