CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
DDX53
(
Sus scrofa
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSSSCG00000012169
T19503_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000012954
KH
50
108
LCFKINNSMAGVVIGRGGSKIKDIQGMTNTKIKIIKGDSEAEVKIFGSRDMKAKAKAAI
Links
Other
KH
family RBPs
Other
Sus scrofa
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R018778
Ailuropoda melanoleuca
Ame_R018778
N
0.831
DDX53
Cavia porcellus
ENSCPOG00000013960
N
0.712
DDX53
Homo sapiens
ENSG00000184735
N
0.746
DDX53
Loxodonta africana
ENSLAFG00000011531
N
0.763
DDX53
Otolemur garnettii
ENSOGAG00000010131
N
0.712
DDX53
Pan troglodytes
ENSPTRG00000028313
N
0.729
ENSPPYG00000020185
Pongo pygmaeus
ENSPPYG00000020185
N
0.729
DDX53
Pteropus vampyrus
ENSPVAG00000001484
N
0.831
DDX53
Tupaia belangeri
ENSTBEG00000014650
N
0.729
DDX53
Tursiops truncatus
ENSTTRG00000016514
N
0.780
DDX53
Vicugna pacos
ENSVPAG00000007860
N
0.797