CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R018778
(
Ailuropoda melanoleuca
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Ame_R018778
T21603_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R018778
KH
68
126
LCFRLRSNMIGVVIGRGGSKIKDIQAMTNTKIQIIKGDSEAEVKIFGATDMKAKAKAAI
Links
Other
KH
family RBPs
Other
Ailuropoda melanoleuca
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DDX53
Vicugna pacos
ENSVPAG00000007860
N
0.847
DDX53
Sus scrofa
ENSSSCG00000012169
N
0.831
DDX53
Tupaia belangeri
ENSTBEG00000014650
N
0.780
DDX53
Tursiops truncatus
ENSTTRG00000016514
N
0.763
DDX53
Pteropus vampyrus
ENSPVAG00000001484
N
0.763
DDX53
Loxodonta africana
ENSLAFG00000011531
N
0.729
DDX43
Loxodonta africana
ENSLAFG00000012755
N
0.721
DDX53
Otolemur garnettii
ENSOGAG00000010131
N
0.712
DDX53
Homo sapiens
ENSG00000184735
N
0.712