CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
estExt_fgenesh1_pg.C_1350031
(
Capitella teleta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
estExt_fgenesh1_pg.C_1350031
T20831_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_1350031
KH
315
375
KKVPVPSTAISRVIGRGGCNINAIREVSGAHIEVDKAKGQGDRNITIKGSADATRSANTLI
Links
Other
KH
family RBPs
Other
Capitella teleta
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s11505g3t1
Acyrtosiphon pisum
DGIL_AUG5s11505g3t1
N
0.000
DGIL_AUG5s8618g4t1
Acyrtosiphon pisum
DGIL_AUG5s8618g4t1
N
0.000
AAEL012045
Aedes aegypti
AAEL012045
N
0.000
AGAP005006
Anopheles gambiae
AGAP005006
N
0.000
amel4_ncbi_hmm17771
Apis mellifera
amel4_ncbi_hmm17771
N
0.000
BGIBMGA003602
Bombyx mori
BGIBMGA003602
N
0.000
e_gw1.11.101.1
Capitella teleta
e_gw1.11.101.1
N
0.000
CpipJ_CPIJ014539
Culex pipiens
CpipJ_CPIJ014539
N
0.000
CPIJ014539
Culex quinquefasciatus
CPIJ014539
N
0.000
estExt_Genewise1.C_650028
Daphnia pulex
estExt_Genewise1.C_650028
N
0.000
GF11923
Drosophila ananassae
FBgn0088962
N
0.000
GG22076
Drosophila erecta
FBgn0114251
N
0.000
GH20523
Drosophila grimshawi
FBgn0127986
N
0.000
CG9346
Drosophila melanogaster
FBgn0034572
N
0.000
GI21069
Drosophila mojavensis
FBgn0143801
N
0.000
GL10142
Drosophila persimilis
FBgn0147752
N
0.000
GA21718-RA
Drosophila pseudoobscura
FBgn0081703
N
0.000
GM15794
Drosophila sechellia
FBgn0170710
N
0.000
GD11555
Drosophila simulans
FBgn0183296
N
0.000
GJ21992
Drosophila virilis
FBgn0209106
N
0.000
GK22959
Drosophila willistoni
FBgn0224921
N
0.000
GE12157
Drosophila yakuba
FBgn0229923
N
0.000
e_gw1.134.6.1
Lottia gigantea
e_gw1.134.6.1
N
0.000
nasonia_NCBI_hmm274824
Nasonia vitripennis
nasonia_NCBI_hmm274824
N
0.000
Sjc_0023880
Schistosoma japonicum
Sjc_0023880
N
0.000
Smp_161730
Schistosoma mansoni
Smp_161730
N
0.000
amel4_ncbi_hmm17771
Tribolium castaneum
amel4_ncbi_hmm17771
N
0.000