CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIBMGA006328
(
Bombyx mori
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
BGIBMGA006328
T21503_0.6
SilkDB (2008-Apr-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA006328
KH
912
974
CKKVSVASHAISRVIGRAGSNINAIRSVTGAHIEVDKQSKGQGERIITIKGSAEATKQAGVLI
Links
Other
KH
family RBPs
Other
Bombyx mori
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PHUM473040
Pediculus humanus
PHUM473040
N
0.825
amel4_ncbi_hmm44335
Apis mellifera
amel4_ncbi_hmm44335
N
0.794
DGIL_AUG5s5041g4t3
Acyrtosiphon pisum
DGIL_AUG5s5041g4t3
N
0.778
CpipJ_CPIJ002709
Culex pipiens
CpipJ_CPIJ002709
N
0.746
GH18670
Drosophila grimshawi
FBgn0126137
N
0.746
CPIJ002709
Culex quinquefasciatus
CPIJ002709
N
0.746
AGAP003519
Anopheles gambiae
AGAP003519
N
0.746
GJ10528
Drosophila virilis
FBgn0197808
N
0.746
GK11389
Drosophila willistoni
FBgn0213400
N
0.746
estExt_fgenesh1_pg.C_1350031
Capitella teleta
estExt_fgenesh1_pg.C_1350031
N
0.730
GA27251-RA
Drosophila pseudoobscura
FBgn0248619
N
0.730
GG11270
Drosophila erecta
FBgn0103571
N
0.730
mask
Drosophila melanogaster
FBgn0043884
N
0.730
GF16118
Drosophila ananassae
FBgn0093140
N
0.730
GE23462
Drosophila yakuba
FBgn0240644
N
0.730