CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_01444
(
Trichophyton tonsurans
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
TESG_01444
T23274_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_01444T0
La
115
173
IRKQVEFYFSDSNLPMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQPFSAIVEALKSS
TESG_01444T0
RRM
224
278
EEPSTQFDIEAFFTPYGPTNAVRLRRAMDKTFKGSVFVEFETEDLQKAFLAIEPK
Links
Other
La,RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
gw.1146.7.1
Nematostella vectensis
gw.1146.7.1
N
0.000