CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_01444
(
Trichophyton tonsurans
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
TESG_01444
T23274_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_01444T0
La
115
173
IRKQVEFYFSDSNLPMDKFLLSKVGGSENRPVELSLLHSFKRMRRFQPFSAIVEALKSS
TESG_01444T0
RRM
224
278
EEPSTQFDIEAFFTPYGPTNAVRLRRAMDKTFKGSVFVEFETEDLQKAFLAIEPK
Links
Other
La,RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TEQG_02174
Trichophyton equinum
TEQG_02174
N
1.000
ARB_01641
Arthroderma benhamiae
ARB_01641
N
0.991
TRV_05156
Trichophyton verrucosum
TRV_05156
N
0.965
TERG_07656
Trichophyton rubrum
TERG_07656
N
0.941
MCYG_01238
Microsporum canis
MCYG_01238
N
0.930
MGYG_01788
Microsporum gypseum
MGYG_01788
N
0.924
UREG_03619
Uncinocarpus reesii
UREG_03619
N
0.879
BDBG_00954
Blastomyces dermatitidis
BDBG_00954
N
0.870
PABG_00372
Paracoccidioides brasiliensis
PABG_00372
N
0.861
CPSG_09523
Coccidioides posadasii
CPSG_09523
N
0.852
CIMG_06864
Coccidioides immitis
CIMG_06864
N
0.852
HCAG_00786
Histoplasma capsulatum
HCAG_00786
N
0.840
ATEG_00450
Aspergillus terreus
CADATEAG00009019
N
0.825
fgenesh1_pg.00083_#_507
Aspergillus carbonarius
fgenesh1_pg.00083_#_507
N
0.810
An08g05260
Aspergillus niger
CADANGAG00006847
N
0.800
NFIA_012960
Neosartorya fischeri
CADNFIAG00001025
N
0.792
AFUA_1G12590
Aspergillus fumigatus
CADAFUAG00007294
N
0.792
AFLA_066270
Aspergillus flavus
CADAFLAG00008051
N
0.775
AO090001000218
Aspergillus oryzae
CADAORAG00000197
N
0.775
Pc13g13010
Penicillium chrysogenum
Pc13g13010
N
0.768
ACLA_022870
Aspergillus clavatus
CADACLAG00002218
N
0.767
ANIA_01045
Aspergillus nidulans
CADANIAG00001597
N
0.765
PMAA_068330
Penicillium marneffei
PMAA_068330
N
0.740