CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TAB2
(
Vicugna pacos
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSVPAG00000010086
T26901_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000009383
RanBP ZF
665
693
EGAQWNCTACTFLNHPALIRCEQCEMPRH
Links
Other
RanBP ZF
family RBPs
Other
Vicugna pacos
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC_Os01g52000
Oryza sativa
LOC_Os01g52000
N
0.000
LOC_Os08g03180
Oryza sativa
LOC_Os08g03180
N
0.000
LOC_Os10g06430
Oryza sativa
LOC_Os10g06430
N
0.000
LOC_Os10g24640
Oryza sativa
LOC_Os10g24640
N
0.000
LOC_Os10g26030
Oryza sativa
LOC_Os10g26030
N
0.000
LOC_Os11g19910
Oryza sativa
LOC_Os11g19910
N
0.000
LOC_Os11g21830
Oryza sativa
LOC_Os11g21830
N
0.000
LOC_Os11g23244
Oryza sativa
LOC_Os11g23244
N
0.000
LOC_Os11g38820
Oryza sativa
LOC_Os11g38820
N
0.000
LOC_Os11g39950
Oryza sativa
LOC_Os11g39950
N
0.000
LOC_Os12g18320
Oryza sativa
LOC_Os12g18320
N
0.000
LOC_Os12g33260
Oryza sativa
LOC_Os12g33260
N
0.000
LOC_Os07g17090
Oryza sativa
LOC_Os07g17090
N
0.000
LOC_Os07g15080
Oryza sativa
LOC_Os07g15080
N
0.000
LOC_Os07g05430
Oryza sativa
LOC_Os07g05430
N
0.000
LOC_Os02g05260
Oryza sativa
LOC_Os02g05260
N
0.000
LOC_Os02g34030
Oryza sativa
LOC_Os02g34030
N
0.000
LOC_Os02g44180
Oryza sativa
LOC_Os02g44180
N
0.000
LOC_Os03g05850
Oryza sativa
LOC_Os03g05850
N
0.000
LOC_Os03g28110
Oryza sativa
LOC_Os03g28110
N
0.000
LOC_Os03g44360
Oryza sativa
LOC_Os03g44360
N
0.000
LOC_Os03g47410
Oryza sativa
LOC_Os03g47410
N
0.000
LOC_Os03g56530
Oryza sativa
LOC_Os03g56530
N
0.000
LOC_Os04g06960
Oryza sativa
LOC_Os04g06960
N
0.000
LOC_Os04g43950
Oryza sativa
LOC_Os04g43950
N
0.000
LOC_Os06g31350
Oryza sativa
LOC_Os06g31350
N
0.000
LOC_Os12g43179
Oryza sativa
LOC_Os12g43179
N
0.000