CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SPPG_01899
(
Spizellomyces punctatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPPG_01899
T30807_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPPG_01899T0
RRM
9
79
VFVGNIPYDLTEPQLIDIFKEVGPVVSFRLVFDRETGKPKGYGFCTFQDAETAASAVRNLNSYDVGGRQLR
Links
Other
RRM
family RBPs
Other
Spizellomyces punctatus
RBPs
116 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R017769
Ailuropoda melanoleuca
Ame_R017769
N
0.000
RBM33
Bos taurus
ENSBTAG00000010243
N
0.000
LOC100395960
Callithrix jacchus
ENSCJAG00000020427
N
0.000
ENSCAFG00000005100
Canis familiaris
ENSCAFG00000005100
N
0.000
RBM33
Cavia porcellus
ENSCPOG00000011852
N
0.000
RBM33
Choloepus hoffmanni
ENSCHOG00000004031
N
0.000
Rbm33
Dipodomys ordii
ENSDORG00000013758
N
0.000
ENSECAG00000022306
Equus caballus
ENSECAG00000022306
N
0.000
RBM33
Felis catus
ENSFCAG00000006602
N
0.000
RBM33
Gallus gallus
ENSGALG00000006372
N
0.000
RBM33
Gorilla gorilla
ENSGGOG00000003382
N
0.000
RBM33
Homo sapiens
ENSG00000184863
N
0.000
RBM33
Loxodonta africana
ENSLAFG00000015795
N
0.000
ENSMMUG00000007353
Macaca mulatta
ENSMMUG00000007353
N
0.000
RBM33
Macropus eugenii
ENSMEUG00000010548
N
0.000
RBM33
Meleagris gallopavo
ENSMGAG00000004903
N
0.000
ENSMODG00000005006
Monodelphis domestica
ENSMODG00000005006
N
0.000
Rbm33
Mus musculus
ENSMUSG00000048271
N
0.000
RBM33
Ochotona princeps
ENSOPRG00000014522
N
0.000
RBM33
Oryctolagus cuniculus
ENSOCUG00000012142
N
0.000
ENSOGAG00000000174
Otolemur garnettii
ENSOGAG00000000174
N
0.000
RBM33
Pan troglodytes
ENSPTRG00000019911
N
0.000
ENSPPYG00000018216
Pongo pygmaeus
ENSPPYG00000018216
N
0.000
RBM33
Procavia capensis
ENSPCAG00000006296
N
0.000
RBM33
Pteropus vampyrus
ENSPVAG00000000221
N
0.000
Rbm33
Rattus norvegicus
ENSRNOG00000006718
N
0.000
RBM33
Sus scrofa
ENSSSCG00000016417
N
0.000
RBM33
Taeniopygia guttata
ENSTGUG00000000696
N
0.000
RBM33
Tarsius syrichta
ENSTSYG00000007529
N
0.000
RBM33
Tursiops truncatus
ENSTTRG00000013715
N
0.000
NP_001017336.1
Xenopus tropicalis
ENSXETG00000013498
N
0.000