amel4_ncbi_hmm3241 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm3241 T31905_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.817
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.817
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.817
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.817
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm3241 RRM 16 86

Links

Other RRM family RBPs
Other Apis mellifera RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_kg.4_#_470_#_2_2924_CFAF_CFAG_CFAH_EXTA Agaricus bisporus fgenesh2_kg.4_#_470_#_2_2924_CFAF_CFAG_CFAH_EXTA N 0.000
CC1G_00345 Coprinopsis cinerea CC1G_00345 N 0.000
CNBG_2125 Cryptococcus neoformans CNBG_2125 N 0.000
e_gw1.4.964.1 Heterobasidion annosum e_gw1.4.964.1 N 0.000
estExt_Genewise1_worm.C_40476 Laccaria bicolor estExt_Genewise1_worm.C_40476 N 0.000
gwh2.22.107.1 Phanerochaete chrysosporium gwh2.22.107.1 N 0.000
fgenesh2_pg.4_#_606 Pleurotus ostreatus fgenesh2_pg.4_#_606 N 0.000
estExt_fgenesh3_pg.C_140043 Postia placenta estExt_fgenesh3_pg.C_140043 N 0.000
estExt_fgenesh1_pm.C_10202 Schizophyllum commune estExt_fgenesh1_pm.C_10202 N 0.000