DGIL_AUG5s3525g11t1 (Acyrtosiphon pisum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 DGIL_AUG5s3525g11t1 T32055_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CNOT4
M147_0.6 		Homo sapiens GACAGA RNAcompete
Ray et al.(2013)
RNCMPT00156 		0.727
Cnot4
M008_0.6 		Drosophila melanogaster ASACAHW RNAcompete
Ray et al.(2013)
RNCMPT00008 		0.701
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
DGIL_AUG5s3525g11t1 RRM 111 187

Links

Other RRM family RBPs
Other Acyrtosiphon pisum RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ADR062W Ashbya gossypii ADR062W N 0.000
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.000
orf19.7385 Candida albicans orf19.7385 N 0.000
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.000
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.000
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.000
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.000
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.000
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.000
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.000
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.000
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.000
estExt_fgenesh1_pg.C_120231 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_120231 N 0.000
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.000
NCU05007 Neurospora crassa NCU05007 N 0.000
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.000
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.000
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.000
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.000
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.000
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.000
LEE1 Saccharomyces cerevisiae YPL054W N 0.000
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.000
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.000
SPCC1739.01 Schizosaccharomyces pombe SPCC1739.01 N 0.000
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.000
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.000
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.000
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.000
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.000
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.000