CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AFLA_007030
(
Aspergillus flavus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADAFLAG00010766
T33461_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFLAP00010766
RRM
536
598
LFVGGVTSSEAHLRSLFGKFGIVQTCIVNIDKRHAFIKMISRQDAVLAREGMESYKSGDMQLR
Links
Other
RRM
family RBPs
Other
Aspergillus flavus
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_07074
Arthroderma benhamiae
ARB_07074
N
0.778
fgenesh1_pg.00153_#_263
Aspergillus carbonarius
fgenesh1_pg.00153_#_263
N
0.937
ACLA_000920
Aspergillus clavatus
CADACLAG00000330
N
0.968
AFUA_5G04240
Aspergillus fumigatus
CADAFUAG00002869
N
0.905
ANIA_08276
Aspergillus nidulans
CADANIAG00004336
N
0.889
An09g06700
Aspergillus niger
CADANGAG00008209
N
0.952
AO090102000629
Aspergillus oryzae
CADAORAG00009913
N
1.000
ATEG_07989
Aspergillus terreus
CADATEAG00005162
N
0.952
BDBG_05846
Blastomyces dermatitidis
BDBG_05846
N
0.873
CIMG_06293
Coccidioides immitis
CIMG_06293
N
0.841
CPSG_00779
Coccidioides posadasii
CPSG_00779
N
0.841
HCAG_11161
Histoplasma capsulatum
HCAG_11161
N
0.857
MCYG_06836
Microsporum canis
MCYG_06836
N
0.810
MGYG_03781
Microsporum gypseum
MGYG_03781
N
0.794
NFIA_037860
Neosartorya fischeri
CADNFIAG00003716
N
0.952
PABG_07318
Paracoccidioides brasiliensis
PABG_07318
N
0.873
Pc12g05410
Penicillium chrysogenum
Pc12g05410
N
0.857
PMAA_095320
Penicillium marneffei
PMAA_095320
N
0.778
TEQG_02925
Trichophyton equinum
TEQG_02925
N
0.778
TERG_04128
Trichophyton rubrum
TERG_04128
N
0.778
TRV_04696
Trichophyton verrucosum
TRV_04696
N
0.778
UREG_04091
Uncinocarpus reesii
UREG_04091
N
0.794