CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_02298
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00000182
T33724_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00000182
RRM
82
149
HVGNLSFDATSADISDLFAECGVTNVRIVEDKLTRSPKGFGYVEFETVDGLKKALDLSGATLQGRAIR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB04189.1
Alternaria brassicicola
AB04189.1
N
0.765
ARB_03225
Arthroderma benhamiae
ARB_03225
N
0.779
fgenesh1_pg.00815_#_18
Aspergillus carbonarius
fgenesh1_pg.00815_#_18
N
0.912
ACLA_075320
Aspergillus clavatus
CADACLAG00006833
N
0.941
AFLA_003440
Aspergillus flavus
CADAFLAG00010410
N
0.897
AFUA_2G16400
Aspergillus fumigatus
CADAFUAG00004230
N
0.912
ANIA_07350
Aspergillus nidulans
CADANIAG00000083
N
0.912
An15g06790
Aspergillus niger
CADANGAG00012358
N
0.941
AO090102000222
Aspergillus oryzae
CADAORAG00009578
N
0.897
BDBG_02754
Blastomyces dermatitidis
BDBG_02754
N
0.765
CIMG_09493
Coccidioides immitis
CIMG_09493
N
0.750
CPSG_04053
Coccidioides posadasii
CPSG_04053
N
0.765
estExt_fgenesh1_pg.C_180055
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_180055
N
0.765
HCAG_06478
Histoplasma capsulatum
HCAG_06478
N
0.765
MCYG_03836
Microsporum canis
MCYG_03836
N
0.765
MGYG_07815
Microsporum gypseum
MGYG_07815
N
0.765
NFIA_091670
Neosartorya fischeri
CADNFIAG00006889
N
0.926
PABG_02641
Paracoccidioides brasiliensis
PABG_02641
N
0.735
Pc21g01490
Penicillium chrysogenum
Pc21g01490
N
0.768
PMAA_034530
Penicillium marneffei
PMAA_034530
N
0.809
EAT82319.2
Phaeosphaeria nodorum
EAT82319.2
N
0.735
PTRG_05566
Pyrenophora tritici repentis
PTRG_05566
N
0.750
SNOG_09984
Stagonospora nodorum
SNOG_09984
N
0.735
TEQG_03246
Trichophyton equinum
TEQG_03246
N
0.779
TERG_05285
Trichophyton rubrum
TERG_05285
N
0.779
TESG_04321
Trichophyton tonsurans
TESG_04321
N
0.779
TRV_02454
Trichophyton verrucosum
TRV_02454
N
0.765
UREG_04821
Uncinocarpus reesii
UREG_04821
N
0.765