CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_01614
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00002872
T33739_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00002872
RRM
34
101
SGLAWHTTDESLRAGFEKFGTVDNAIVVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQEFDGRIIR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GLRG_09758
Colletotrichum graminicola
GLRG_09758
N
0.000
MGG_00444
Magnaporthe oryzae
MGG_00444
N
0.000
estExt_fgenesh1_kg.C_50117
Myceliophthora thermophila
estExt_fgenesh1_kg.C_50117
N
0.000
estExt_fgenesh1_pm.C_sca_2_chr3_3_00106
Nectria haematococca
estExt_fgenesh1_pm.C_sca_2_chr3_3_00106
N
0.000
Pa_4_3880
Podospora anserina
Pa_4_3880
N
0.000
estExt_Genewise1.C_31032
Trichoderma atroviride
estExt_Genewise1.C_31032
N
0.000
estExt_GeneWisePlus.C_80814
Trichoderma reesei
estExt_GeneWisePlus.C_80814
N
0.000
estExt_Genewise1.C_60393
Trichoderma virens
estExt_Genewise1.C_60393
N
0.000
VDBG_09184
Verticillium albo atrum
VDBG_09184
N
0.000
VDAG_07347
Verticillium dahliae
VDAG_07347
N
0.000