CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_01614
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00002872
T33739_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00002872
RRM
34
101
SGLAWHTTDESLRAGFEKFGTVDNAIVVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQEFDGRIIR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TESG_06069
Trichophyton tonsurans
TESG_06069
N
0.732
AFLA_086540
Aspergillus flavus
CADAFLAG00001433
N
0.732
AO090005001419
Aspergillus oryzae
CADAORAG00003299
N
0.732
TERG_04706
Trichophyton rubrum
TERG_04706
N
0.732
MGYG_01973
Microsporum gypseum
MGYG_01973
N
0.718
CIMG_07653
Coccidioides immitis
CIMG_07653
N
0.718
MCYG_06115
Microsporum canis
MCYG_06115
N
0.718
CPSG_09452
Coccidioides posadasii
CPSG_09452
N
0.718
UREG_07630
Uncinocarpus reesii
UREG_07630
N
0.704
BDBG_01954
Blastomyces dermatitidis
BDBG_01954
N
0.704