ENSCJAG00000007019 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000007019 T35536_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.822
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.822
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.822
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013017 RRM 12 82
ENSCJAP00000013020 RRM 12 82

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KLLA0E19229g Kluyveromyces lactis KLLA0E19229g N 0.000
24695_YPL190C Saccharomyces bayanus 24695_YPL190C N 0.000
NAB3 Saccharomyces cerevisiae YPL190C N 0.000
Skud_Contig1252.2 Saccharomyces kudriavzevii Skud_Contig1252.2 N 0.000
21543_Multiple Saccharomyces mikatae 21543_Multiple N 0.000
22141_YPL190C Saccharomyces paradoxus 22141_YPL190C N 0.000