ENSCJAG00000007019 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000007019 T35536_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.822
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.822
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.822
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013017 RRM 12 82
ENSCJAP00000013020 RRM 12 82

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.849
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.849
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.849
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.849
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.847
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.847
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.847
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.847
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.847
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.847
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.847
Fusip1 Homo sapiens ENSG00000188529 D 0.847
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.847
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.847
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.847
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.847
BX511012.1 Homo sapiens ENSG00000215699 I 0.847
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.847
Srsf10 Mus musculus ENSMUSG00000028676 I 0.847
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.847
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.847
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.847
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.833
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.833
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.833
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.833
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.831
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.819
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.819
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.819
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.817
AAH46695 Xenopus laevis AAH46695 I 0.803
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.789
Srsf12 Mus musculus ENSMUSG00000054679 I 0.789
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.789
SRSF12 Homo sapiens ENSG00000154548 I 0.789
AAH84231 Xenopus laevis AAH84231 I 0.775
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.775
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.764
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.764
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.764
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.764
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.764
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.750
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.750
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.746
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.746
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.736
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.736
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.736
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.736
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.733
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.732
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.726
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.726
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.722
CR293507.1 Danio rerio ENSDARG00000022415 I 0.722
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.708
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.708
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.708