CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LOC100397230
(
Callithrix jacchus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCJAG00000008143
T35548_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000008949
RRM
16
85
LFIGGLSFETTDESLRSHFEQWGRLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE
Links
Other
RRM
family RBPs
Other
Callithrix jacchus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG08763
Caenorhabditis briggsae
CBG08763
N
0.000
CJA23793
Caenorhabditis japonica
CJA23793
N
0.000
CJA23650
Caenorhabditis japonica
CJA23650
N
0.000
CJA23492
Caenorhabditis japonica
CJA23492
N
0.000
CJA23027
Caenorhabditis japonica
CJA23027
N
0.000
CJA22105
Caenorhabditis japonica
CJA22105
N
0.000
CJA21786
Caenorhabditis japonica
CJA21786
N
0.000
CJA21290
Caenorhabditis japonica
CJA21290
N
0.000
CJA21076
Caenorhabditis japonica
CJA21076
N
0.000
CJA19647
Caenorhabditis japonica
CJA19647
N
0.000
CJA23880
Caenorhabditis japonica
CJA23880
N
0.000
CJA24356
Caenorhabditis japonica
CJA24356
N
0.000
CJA24410
Caenorhabditis japonica
CJA24410
N
0.000
CJA29053
Caenorhabditis japonica
CJA29053
N
0.000
CJA28132
Caenorhabditis japonica
CJA28132
N
0.000
CJA28002
Caenorhabditis japonica
CJA28002
N
0.000
CJA27741
Caenorhabditis japonica
CJA27741
N
0.000
CJA27243
Caenorhabditis japonica
CJA27243
N
0.000
CJA26989
Caenorhabditis japonica
CJA26989
N
0.000
CJA26568
Caenorhabditis japonica
CJA26568
N
0.000
CJA26146
Caenorhabditis japonica
CJA26146
N
0.000
CJA25140
Caenorhabditis japonica
CJA25140
N
0.000
CJA18092
Caenorhabditis japonica
CJA18092
N
0.000
CJA17448
Caenorhabditis japonica
CJA17448
N
0.000
CJA17240
Caenorhabditis japonica
CJA17240
N
0.000
CJA05850
Caenorhabditis japonica
CJA05850
N
0.000
CJA05814
Caenorhabditis japonica
CJA05814
N
0.000
CJA05078
Caenorhabditis japonica
CJA05078
N
0.000
CJA04336
Caenorhabditis japonica
CJA04336
N
0.000
CJA03777
Caenorhabditis japonica
CJA03777
N
0.000
CJA02757
Caenorhabditis japonica
CJA02757
N
0.000
CJA02670
Caenorhabditis japonica
CJA02670
N
0.000
CJA02546
Caenorhabditis japonica
CJA02546
N
0.000
CJA00525
Caenorhabditis japonica
CJA00525
N
0.000
CJA07934
Caenorhabditis japonica
CJA07934
N
0.000
CJA10177
Caenorhabditis japonica
CJA10177
N
0.000
CJA15515
Caenorhabditis japonica
CJA15515
N
0.000
CJA15447
Caenorhabditis japonica
CJA15447
N
0.000
CJA13676
Caenorhabditis japonica
CJA13676
N
0.000
CJA13245
Caenorhabditis japonica
CJA13245
N
0.000
CJA13217
Caenorhabditis japonica
CJA13217
N
0.000
CJA13138
Caenorhabditis japonica
CJA13138
N
0.000
CJA12763
Caenorhabditis japonica
CJA12763
N
0.000
CJA11030
Caenorhabditis japonica
CJA11030
N
0.000
CJA10256
Caenorhabditis japonica
CJA10256
N
0.000
CJA00142
Caenorhabditis japonica
CJA00142
N
0.000