CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBM33
(
Cavia porcellus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCPOG00000011852
T35842_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000010662
RRM
1098
1162
VSVEGLSSSTTDVQLKSLLMSVGPIQSLQMLPQQRKAIAKFKEPAHALAFQQKFHRHMIDLSHIN
Links
Other
RRM
family RBPs
Other
Cavia porcellus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R002664
Ailuropoda melanoleuca
Ame_R002664
I
0.000
Ame_R011226
Ailuropoda melanoleuca
Ame_R011226
I
0.000
MBNL2
Anolis carolinensis
ENSACAG00000000969
I
0.000
MBNL1
Anolis carolinensis
ENSACAG00000008014
I
0.000
MBNL3
Anolis carolinensis
ENSACAG00000009557
I
0.000
A5PKK4_BOVIN
Bos taurus
ENSBTAG00000018313
I
0.000
LOC100403733
Callithrix jacchus
ENSCJAG00000004294
I
0.000
LOC100397507
Callithrix jacchus
ENSCJAG00000004080
I
0.000
LOC100392264
Callithrix jacchus
ENSCJAG00000001054
I
0.000
MBNL3
Canis familiaris
ENSCAFG00000018841
I
0.000
MBNL1
Canis familiaris
ENSCAFG00000008603
I
0.000
MBNL2
Canis familiaris
ENSCAFG00000005523
I
0.000
MBNL2
Cavia porcellus
ENSCPOG00000010320
I
0.000
MBNL1
Cavia porcellus
ENSCPOG00000011516
I
0.000
MBNL2
Choloepus hoffmanni
ENSCHOG00000000049
I
0.000
mbnl3
Danio rerio
ENSDARG00000016085
I
0.000
mbnl2
Danio rerio
ENSDARG00000018460
I
0.000
MBNL1
Dasypus novemcinctus
ENSDNOG00000012815
I
0.000
MBNL3
Dasypus novemcinctus
ENSDNOG00000016518
I
0.000
Mbnl3
Dipodomys ordii
ENSDORG00000012854
I
0.000
MBNL2
Echinops telfairi
ENSETEG00000003784
I
0.000
LOC100054316
Equus caballus
ENSECAG00000021076
I
0.000
LOC100050018
Equus caballus
ENSECAG00000024349
I
0.000
MBNL1
Erinaceus europaeus
ENSEEUG00000009449
I
0.000
MBNL2
Erinaceus europaeus
ENSEEUG00000006209
I
0.000
MBNL1_CHICK
Gallus gallus
ENSGALG00000010361
I
0.000
A5HMN7_CHICK
Gallus gallus
ENSGALG00000006066
I
0.000
A3F958_CHICK
Gallus gallus
ENSGALG00000016890
I
0.000
MBNL1
Gasterosteus aculeatus
ENSGACG00000015003
I
0.000
ENSGACG00000015105
Gasterosteus aculeatus
ENSGACG00000015105
I
0.000
MBNL3
Gasterosteus aculeatus
ENSGACG00000017015
I
0.000
ENSGACG00000004222
Gasterosteus aculeatus
ENSGACG00000004222
I
0.000
MBNL1
Gasterosteus aculeatus
ENSGACG00000010253
I
0.000
MBNL1
Gorilla gorilla
ENSGGOG00000009430
I
0.000
MBNL2
Gorilla gorilla
ENSGGOG00000008349
I
0.000
MBNL3
Gorilla gorilla
ENSGGOG00000007756
I
0.000
MBNL1
Homo sapiens
ENSG00000152601
D
0.000
MBNL3
Homo sapiens
ENSG00000076770
I
0.000
MBNL2
Homo sapiens
ENSG00000139793
I
0.000
MBNL3
Loxodonta africana
ENSLAFG00000011822
I
0.000
MBNL2
Loxodonta africana
ENSLAFG00000014497
I
0.000
MBNL1
Loxodonta africana
ENSLAFG00000017683
I
0.000
MBNL1
Macaca mulatta
ENSMMUG00000015910
I
0.000
MBNL3
Macaca mulatta
ENSMMUG00000003071
I
0.000
MBNL1
Macropus eugenii
ENSMEUG00000006617
I
0.000
MBNL3
Macropus eugenii
ENSMEUG00000001183
I
0.000
MBNL2
Macropus eugenii
ENSMEUG00000016143
I
0.000
MBNL2
Meleagris gallopavo
ENSMGAG00000014904
I
0.000
MBNL3
Meleagris gallopavo
ENSMGAG00000003064
I
0.000
MBNL3
Microcebus murinus
ENSMICG00000017340
I
0.000
MBNL2
Monodelphis domestica
ENSMODG00000008566
I
0.000
MBNL3
Monodelphis domestica
ENSMODG00000015304
I
0.000
MBNL1
Monodelphis domestica
ENSMODG00000015838
I
0.000
Mbnl3
Mus musculus
ENSMUSG00000036109
I
0.000
Mbnl1
Mus musculus
ENSMUSG00000027763
I
0.000
Mbnl2
Mus musculus
ENSMUSG00000022139
I
0.000
MBNL3
Myotis lucifugus
ENSMLUG00000016240
I
0.000
MBNL2
Myotis lucifugus
ENSMLUG00000010920
I
0.000
MBNL1
Myotis lucifugus
ENSMLUG00000014029
I
0.000
MBNL1
Ochotona princeps
ENSOPRG00000009633
I
0.000
MBNL2
Ochotona princeps
ENSOPRG00000007427
I
0.000
MBNL2
Ornithorhynchus anatinus
ENSOANG00000014911
I
0.000
MBNL1
Ornithorhynchus anatinus
ENSOANG00000007992
I
0.000
MBNL3
Ornithorhynchus anatinus
ENSOANG00000011697
I
0.000
MBNL1
Oryctolagus cuniculus
ENSOCUG00000007601
I
0.000
MBNL3
Oryctolagus cuniculus
ENSOCUG00000014979
I
0.000
MBNL2
Oryctolagus cuniculus
ENSOCUG00000000220
I
0.000
MBNL1
Oryzias latipes
ENSORLG00000015858
I
0.000
MBNL1
Oryzias latipes
ENSORLG00000005925
I
0.000
ENSORLG00000005419
Oryzias latipes
ENSORLG00000005419
I
0.000
MBNL3
Oryzias latipes
ENSORLG00000002183
I
0.000
MBNL1
Pan troglodytes
ENSPTRG00000015542
I
0.000
MBNL2
Pan troglodytes
ENSPTRG00000005982
I
0.000
ENSPPYG00000020726
Pongo pygmaeus
ENSPPYG00000020726
I
0.000
ENSPPYG00000014218
Pongo pygmaeus
ENSPPYG00000014218
I
0.000
ENSPPYG00000005456
Pongo pygmaeus
ENSPPYG00000005456
I
0.000
MBNL2
Procavia capensis
ENSPCAG00000005151
I
0.000
MBNL1
Pteropus vampyrus
ENSPVAG00000002760
I
0.000
MBNL2
Pteropus vampyrus
ENSPVAG00000003263
I
0.000
MBNL3
Pteropus vampyrus
ENSPVAG00000006115
I
0.000
Mbnl2
Rattus norvegicus
ENSRNOG00000010737
I
0.000
Mbnl3
Rattus norvegicus
ENSRNOG00000002487
I
0.000
MBNL2
Sorex araneus
ENSSARG00000002868
I
0.000
MBNL3
Sorex araneus
ENSSARG00000006397
I
0.000
MBNL2
Spermophilus tridecemlineatus
ENSSTOG00000013149
I
0.000
MBNL1
Spermophilus tridecemlineatus
ENSSTOG00000009457
I
0.000
MBNL3
Spermophilus tridecemlineatus
ENSSTOG00000006715
I
0.000
XP_001194015.1
Strongylocentrotus purpuratus
XP_001194015.1
I
0.000
MBNL2
Sus scrofa
ENSSSCG00000009505
I
0.000
MBNL2
Taeniopygia guttata
ENSTGUG00000011104
I
0.000
MBNL1
Taeniopygia guttata
ENSTGUG00000011341
I
0.000
MBNL3
Taeniopygia guttata
ENSTGUG00000002999
I
0.000
MBNL1
Takifugu rubripes
ENSTRUG00000013858
I
0.000
MBNL3_FUGRU
Takifugu rubripes
ENSTRUG00000012666
I
0.000
MBN2A_FUGRU
Takifugu rubripes
ENSTRUG00000010220
I
0.000
MBNL1
Takifugu rubripes
ENSTRUG00000001892
I
0.000
ENSTRUG00000017351
Takifugu rubripes
ENSTRUG00000017351
I
0.000
MBNL1
Tarsius syrichta
ENSTSYG00000010491
I
0.000
MBNL2
Tarsius syrichta
ENSTSYG00000004574
I
0.000
MBNL3
Tetraodon nigroviridis
ENSTNIG00000016812
I
0.000
ENSTNIG00000013977
Tetraodon nigroviridis
ENSTNIG00000013977
I
0.000
MBNL1
Tetraodon nigroviridis
ENSTNIG00000003878
I
0.000
MBNL2
Tupaia belangeri
ENSTBEG00000005178
I
0.000
MBNL2
Tursiops truncatus
ENSTTRG00000008491
I
0.000
MBNL1
Tursiops truncatus
ENSTTRG00000009991
I
0.000
MBNL3
Tursiops truncatus
ENSTTRG00000016841
I
0.000
MBNL2
Vicugna pacos
ENSVPAG00000010696
I
0.000
MBNL1
Vicugna pacos
ENSVPAG00000006162
I
0.000
MBNL3
Vicugna pacos
ENSVPAG00000004743
I
0.000
mbnl3
Xenopus tropicalis
ENSXETG00000005409
I
0.000
mbnl1
Xenopus tropicalis
ENSXETG00000021655
I
0.000