CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Equus caballus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSECAG00000022014
T36697_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000019470
RRM
7
52
LQDYELKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLI
ENSECAP00000019470
RRM
62
131
LCITNLPTSFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLQLLGKQLGASAL
ENSECAP00000019470
RRM
151
221
LCIDKLPSDYRDSEELLQVFSSIHKPVFCQLAQDEGSYVGGFAVVEYNTAEHAEEVQQAADGMTIKGSKVQ
Links
Other
RRM
family RBPs
Other
Equus caballus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R012468
Ailuropoda melanoleuca
Ame_R012468
N
0.000
Q0V8H0_BOVIN
Bos taurus
ENSBTAG00000014679
N
0.000
DHX57
Callithrix jacchus
ENSCJAG00000015097
N
0.000
DHX57
Canis familiaris
ENSCAFG00000006228
N
0.000
DHX57
Choloepus hoffmanni
ENSCHOG00000004647
N
0.000
DHX57
Dasypus novemcinctus
ENSDNOG00000016122
N
0.000
Dhx57
Dipodomys ordii
ENSDORG00000013864
N
0.000
DHX57
Equus caballus
ENSECAG00000018758
N
0.000
DHX57
Erinaceus europaeus
ENSEEUG00000004743
N
0.000
DHX57
Felis catus
ENSFCAG00000006258
N
0.000
LOC429336
Gallus gallus
ENSGALG00000014483
N
0.000
DHX57
Gorilla gorilla
ENSGGOG00000008187
N
0.000
DHX57
Homo sapiens
ENSG00000163214
N
0.000
DHX57
Loxodonta africana
ENSLAFG00000002497
N
0.000
DHX57
Macaca mulatta
ENSMMUG00000021066
N
0.000
DHX57
Macropus eugenii
ENSMEUG00000009322
N
0.000
DHX57
Monodelphis domestica
ENSMODG00000008743
N
0.000
Dhx57
Mus musculus
ENSMUSG00000035051
N
0.000
DHX57
Myotis lucifugus
ENSMLUG00000014775
N
0.000
DHX57
Ornithorhynchus anatinus
ENSOANG00000014981
N
0.000
DHX57
Oryctolagus cuniculus
ENSOCUG00000015602
N
0.000
DHX57
Pan troglodytes
ENSPTRG00000011853
N
0.000
ENSPPYG00000012478
Pongo pygmaeus
ENSPPYG00000012478
N
0.000
DHX57
Procavia capensis
ENSPCAG00000002696
N
0.000
DHX57
Pteropus vampyrus
ENSPVAG00000012080
N
0.000
Dhx57
Rattus norvegicus
ENSRNOG00000027329
N
0.000
DHX57
Sus scrofa
ENSSSCG00000008479
N
0.000
DHX57
Taeniopygia guttata
ENSTGUG00000002076
N
0.000
DHX57
Tarsius syrichta
ENSTSYG00000003905
N
0.000
DHX57
Tupaia belangeri
ENSTBEG00000005067
N
0.000
DHX57
Tursiops truncatus
ENSTTRG00000014328
N
0.000
DHX57
Vicugna pacos
ENSVPAG00000003319
N
0.000