CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000012478
(
Pongo pygmaeus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSPPYG00000012478
T03218_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000013937
CCCH ZF
302
326
SLEICKFYLKGNCKFGSKCKFKHEV
Links
Other
CCCH ZF
family RBPs
Other
Pongo pygmaeus
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DHX57
Pteropus vampyrus
ENSPVAG00000012080
N
1.000
DHX57
Vicugna pacos
ENSVPAG00000003319
N
1.000
DHX57
Dasypus novemcinctus
ENSDNOG00000016122
N
0.960
DHX57
Tursiops truncatus
ENSTTRG00000014328
N
0.960
DHX57
Macaca mulatta
ENSMMUG00000021066
N
0.960
DHX57
Tupaia belangeri
ENSTBEG00000005067
N
0.960
DHX57
Gorilla gorilla
ENSGGOG00000008187
N
0.960
DHX57
Sus scrofa
ENSSSCG00000008479
N
0.960
DHX57
Felis catus
ENSFCAG00000006258
N
0.960
DHX57
Pan troglodytes
ENSPTRG00000011853
N
0.920
DHX57
Equus caballus
ENSECAG00000018758
N
0.920
DHX57
Homo sapiens
ENSG00000163214
N
0.920
DHX57
Myotis lucifugus
ENSMLUG00000014775
N
0.920
Dhx57
Mus musculus
ENSMUSG00000035051
N
0.920
DHX57
Canis familiaris
ENSCAFG00000006228
N
0.920
DHX57
Tarsius syrichta
ENSTSYG00000003905
N
0.920
DHX57
Procavia capensis
ENSPCAG00000002696
N
0.920
Dhx57
Rattus norvegicus
ENSRNOG00000027329
N
0.920
Ame_R012468
Ailuropoda melanoleuca
Ame_R012468
N
0.920
Q0V8H0_BOVIN
Bos taurus
ENSBTAG00000014679
N
0.920
DHX57
Callithrix jacchus
ENSCJAG00000015097
N
0.920
DHX57
Loxodonta africana
ENSLAFG00000002497
N
0.920
DHX57
Oryctolagus cuniculus
ENSOCUG00000015602
N
0.920
DHX57
Ochotona princeps
ENSOPRG00000010262
N
0.880
Dhx57
Dipodomys ordii
ENSDORG00000013864
N
0.880
DHX57
Choloepus hoffmanni
ENSCHOG00000004647
N
0.880
DHX57
Echinops telfairi
ENSETEG00000012624
N
0.846
DHX57
Cavia porcellus
ENSCPOG00000009155
N
0.840
DHX57
Erinaceus europaeus
ENSEEUG00000004743
N
0.840
DHX57
Macropus eugenii
ENSMEUG00000009322
N
0.760
LOC429336
Gallus gallus
ENSGALG00000014483
N
0.760
DHX57
Ornithorhynchus anatinus
ENSOANG00000014981
N
0.760
DHX57
Taeniopygia guttata
ENSTGUG00000002076
N
0.720
DHX57
Meleagris gallopavo
ENSMGAG00000007437
N
0.720