ENSGACG00000014500 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000014500 T37520_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.876
U2af50
M078_0.6 		Drosophila melanogaster UUUUUYY RNAcompete
Ray et al.(2013)
RNCMPT00080 		0.790
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000019133 RRM 151 225
ENSGACP00000019133 RRM 261 331
ENSGACP00000019133 RRM 394 457

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Pa_3_11180 Podospora anserina Pa_3_11180 N 0.000
SPPG_00438 Spizellomyces punctatus SPPG_00438 N 0.000
SPPG_08808 Spizellomyces punctatus SPPG_08808 N 0.000
SPPG_08805 Spizellomyces punctatus SPPG_08805 N 0.000
SPPG_08561 Spizellomyces punctatus SPPG_08561 N 0.000
SPPG_08560 Spizellomyces punctatus SPPG_08560 N 0.000
SPPG_08320 Spizellomyces punctatus SPPG_08320 N 0.000
SPPG_08024 Spizellomyces punctatus SPPG_08024 N 0.000
SPPG_06303 Spizellomyces punctatus SPPG_06303 N 0.000
SPPG_03727 Spizellomyces punctatus SPPG_03727 N 0.000
SPPG_03725 Spizellomyces punctatus SPPG_03725 N 0.000
SPPG_03316 Spizellomyces punctatus SPPG_03316 N 0.000
SPPG_01770 Spizellomyces punctatus SPPG_01770 N 0.000
XP_001191181.1 Strongylocentrotus purpuratus XP_001191181.1 N 0.000
XP_001201402.1 Strongylocentrotus purpuratus XP_001201402.1 N 0.000
ENSTNIG00000001528 Tetraodon nigroviridis ENSTNIG00000001528 N 0.000