CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSLAFG00000029211
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000029211
T38132_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000022592
RRM
9
68
LFVGGFNFNTDEQALKDHFSSFGPISEVVIVKDQETQRSRSFGFITFTNSEHASDATGES
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R005750
Ailuropoda melanoleuca
Ame_R005750
I
0.704
Rbm3
Dipodomys ordii
ENSDORG00000000182
I
0.704
LOC100051736
Equus caballus
ENSECAG00000024257
I
0.704
RBM3
Felis catus
ENSFCAG00000002245
I
0.704
RBM3
Homo sapiens
ENSG00000102317
D
0.710
RBM3
Loxodonta africana
ENSLAFG00000007003
I
0.704
XM_001098948.1
Macaca mulatta
ENSMMUG00000004439
I
0.710
Rbm3
Mus musculus
ENSMUSG00000031167
I
0.704
XR_023694.1
Pan troglodytes
ENSPTRG00000021864
I
0.710
ENSPPYG00000020314
Pongo pygmaeus
ENSPPYG00000020314
I
0.710
RBM3
Pteropus vampyrus
ENSPVAG00000015630
I
0.704
Rbm3
Rattus norvegicus
ENSRNOG00000005387
I
0.704