XR_023694.1 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000021864 T40782_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM3
M048_0.6 		Homo sapiens RADACKA RNAcompete
Ray et al.(2013)
RNCMPT00050 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000037540 RRM 8 78
ENSPTRP00000040719 RRM 8 76
ENSPTRP00000041476 RRM 8 50

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM3 Homo sapiens ENSG00000102317 D 1.000
XM_001098948.1 Macaca mulatta ENSMMUG00000004439 I 1.000
RBM3 Gorilla gorilla ENSGGOG00000005864 I 1.000
ENSPPYG00000020314 Pongo pygmaeus ENSPPYG00000020314 I 1.000
Ame_R005750 Ailuropoda melanoleuca Ame_R005750 I 0.986
Rbm3 Dipodomys ordii ENSDORG00000000182 I 0.986
RBM3 Loxodonta africana ENSLAFG00000007003 I 0.986
Rbm3 Mus musculus ENSMUSG00000031167 I 0.986
LOC100051736 Equus caballus ENSECAG00000024257 I 0.986
RBM3 Felis catus ENSFCAG00000002245 I 0.986
RBM3 Pteropus vampyrus ENSPVAG00000015630 I 0.986
Rbm3 Rattus norvegicus ENSRNOG00000005387 I 0.986
RBM3 Cavia porcellus ENSCPOG00000003553 I 0.972
RBM3 Tursiops truncatus ENSTTRG00000008587 I 0.972
ENSOCUG00000002271 Oryctolagus cuniculus ENSOCUG00000002271 I 0.972
Q3ZBA4_BOVIN Bos taurus ENSBTAG00000025848 I 0.971
ENSCAFG00000015485 Canis familiaris ENSCAFG00000015485 I 0.958
ENSMMUG00000018349 Macaca mulatta ENSMMUG00000018349 N 0.932
RBM3 Choloepus hoffmanni ENSCHOG00000007642 I 0.930
XM_549003.1 Canis familiaris ENSCAFG00000016002 I 0.915
ENSCAFG00000023295 Canis familiaris ENSCAFG00000023295 I 0.901
RBM3 Anolis carolinensis ENSACAG00000013718 I 0.887
ENSSSCG00000004801 Sus scrofa ENSSSCG00000004801 I 0.887
ENSSSCG00000004800 Sus scrofa ENSSSCG00000004800 I 0.887
Cirbp Mus musculus ENSMUSG00000045193 I 0.746
Cirbp Rattus norvegicus ENSRNOG00000015999 I 0.746
CIRBP Gorilla gorilla ENSGGOG00000002338 I 0.732
CIRBP Meleagris gallopavo ENSMGAG00000010253 I 0.732
CIRBP Ornithorhynchus anatinus ENSOANG00000012230 I 0.732
LOC706175 Macaca mulatta ENSMMUG00000022101 I 0.732
CIRBP Homo sapiens ENSG00000099622 I 0.732
CIRBP Loxodonta africana ENSLAFG00000032156 I 0.732
LOC100394350 Callithrix jacchus ENSCJAG00000005504 I 0.732
CIRBP Pteropus vampyrus ENSPVAG00000005629 I 0.732
CIRBP Sus scrofa ENSSSCG00000013427 I 0.732
CIRBP Taeniopygia guttata ENSTGUG00000000884 I 0.732
Ame_R011907 Ailuropoda melanoleuca Ame_R011907 I 0.732
CIRBP Tursiops truncatus ENSTTRG00000011049 I 0.732
CIRBP Anolis carolinensis ENSACAG00000000441 I 0.732
CIRBP Canis familiaris ENSCAFG00000019506 I 0.732
Q3SZN4_BOVIN Bos taurus ENSBTAG00000007480 I 0.732
CIRBP Monodelphis domestica ENSMODG00000005290 I 0.718
Q45KQ2_CHICK Gallus gallus ENSGALG00000012225 I 0.718
CIRBP Felis catus ENSFCAG00000013724 I 0.718
ENSLAFG00000029211 Loxodonta africana ENSLAFG00000029211 N 0.710
XR_020876.1 Pan troglodytes ENSPTRG00000010192 I 0.704
BAB19129 Xenopus laevis BAB19129 I 0.704
CIRBP Cavia porcellus ENSCPOG00000019403 N 0.704
Q9DED4 Xenopus laevis Q9DED4 I 0.704
CIRBP Microcebus murinus ENSMICG00000015962 I 0.704
AAH54250 Xenopus laevis AAH54250 I 0.704
cirbp Xenopus tropicalis ENSXETG00000003281 I 0.704