CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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G3BP2
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000004126
T38181_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
G3BP2
M021_0.6
Homo sapiens
AGGAUDR
RNAcompete
Ray et al.(2013)
RNCMPT00021
0.985
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000003763
RRM
333
399
LFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILVAKPIMFRGE
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
88 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
0.910
g3bp2
Danio rerio
ENSDARG00000014790
I
0.881
G3BP2
Danio rerio
ENSDARG00000074572
I
0.910
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.896
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.925