PABPC5 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000006882 T39850_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC5
M162_0.6 		Homo sapiens AGAAADU RNAcompete
Ray et al.(2013)
RNCMPT00171 		0.964
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000006158 RRM 20 90
ENSOGAP00000006158 RRM 108 176
ENSOGAP00000006158 RRM 201 270
ENSOGAP00000006158 RRM 304 372

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCHAS_121090 Plasmodium chabaudi PCHAS_121090 N 0.000