RBM46 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000008714 T42061_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.740
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000011565 RRM 53 122
ENSTNIP00000011565 RRM 133 199
ENSTNIP00000011565 RRM 228 292

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.737
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.732
RBM46 Bos taurus ENSBTAG00000001696 I 0.741
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.737
RBM46 Canis familiaris ENSCAFG00000008473 I 0.737
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.722
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.732
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.737
rbm46 Danio rerio ENSDARG00000079452 I 0.741
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.727
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.702
RBM46 Echinops telfairi ENSETEG00000014902 I 0.737
RBM46 Equus caballus ENSECAG00000007649 I 0.741
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.712
RBM46 Felis catus ENSFCAG00000009246 I 0.727
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.737
RBM46 Homo sapiens ENSG00000151962 D 0.737
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.737
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.737
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.732
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.737
Rbm46 Mus musculus ENSMUSG00000033882 I 0.741
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.737
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.732
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.737
RBM46 Oryzias latipes ENSORLG00000002429 I 0.764
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.737
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.737
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.737
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.737
RBM46 Sorex araneus ENSSARG00000006520 I 0.737
RBM46 Sus scrofa ENSSSCG00000008994 I 0.737
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.701
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.926
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.732
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.722
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.741
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.706