cassava24320.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava24320.valid.m1 T49220_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava24320.valid.m1 RRM 38 108

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI2G58690 Brachypodium distachyon BRADI2G58690 N 0.718
PK23911.1 Cannabis sativa PK23911.1 N 0.775
Glyma18g00480.1 Glycine max Glyma18g00480.1 N 0.775
Glyma11g36580.1 Glycine max Glyma11g36580.1 N 0.704
MDP0000216169 Malus x domestica MDP0000216169 N 0.845
cassava24319.valid.m1 Manihot esculenta cassava24319.valid.m1 N 1.000
cassava7020.valid.m1 Manihot esculenta cassava7020.valid.m1 N 0.873
Medtr3g105170 Medicago truncatula Medtr3g105170 N 0.704
mgf002451m Mimulus guttatus mgf002451m N 0.831
mgf004068m Mimulus guttatus mgf004068m N 0.831
PDK_20s1312461g002 Phoenix dactylifera PDK_20s1312461g002 N 0.718
A9P9S1_POPTR Populus trichocarpa POPTR_0017s08570 N 0.746
ppa013208m Prunus persica ppa013208m N 0.817
29629.m001443 Ricinus communis 29629.m001443 N 0.873
GSVIVG00021024001 Vitis vinifera GSVIVG00021024001 N 0.803