MDP0000216169 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000216169 T57442_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000216169 RRM 37 107

Links

Other RRM family RBPs
Other Malus x domestica RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa013208m Prunus persica ppa013208m N 0.859
GSVIVG00021024001 Vitis vinifera GSVIVG00021024001 N 0.859
cassava24319.valid.m1 Manihot esculenta cassava24319.valid.m1 N 0.845
cassava24320.valid.m1 Manihot esculenta cassava24320.valid.m1 N 0.845
29629.m001443 Ricinus communis 29629.m001443 N 0.831
mgf002451m Mimulus guttatus mgf002451m N 0.817
PK23911.1 Cannabis sativa PK23911.1 N 0.817
mgf004068m Mimulus guttatus mgf004068m N 0.817
PDK_20s1312461g002 Phoenix dactylifera PDK_20s1312461g002 N 0.789
cassava7020.valid.m1 Manihot esculenta cassava7020.valid.m1 N 0.775
Glyma18g00480.1 Glycine max Glyma18g00480.1 N 0.746
A9P9S1_POPTR Populus trichocarpa POPTR_0017s08570 N 0.746
BRADI2G58690 Brachypodium distachyon BRADI2G58690 N 0.746
Medtr3g105170 Medicago truncatula Medtr3g105170 N 0.732
BGIOSIBCE004733 Oryza indica BGIOSIBCE004733 N 0.732
LOC_Os01g68790 Oryza sativa LOC_Os01g68790 N 0.732