CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
estExt_GeneWisePlus.C_30660
(
Trichoderma reesei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
estExt_GeneWisePlus.C_30660
T51569_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GeneWisePlus.C_30660
RRM
29
101
IYITNLPSAKIQKQDLRTALYMLFSTFGPVLDIVALKTMEMRGQAHIVFRDIQAATQAMRTMDGQTFLGRPMK
Links
Other
RRM
family RBPs
Other
Trichoderma reesei
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H3
Gorilla gorilla
ENSGGOG00000002833
N
0.000
XP_001202203.1
Strongylocentrotus purpuratus
XP_001202203.1
N
0.000