CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ZC3H3
(
Gorilla gorilla
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSGGOG00000002833
T02745_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000002790
CCCH ZF
652
678
KRKEYCMYYNRFGRCNRGERCPYIHDP
ENSGGOP00000002790
CCCH ZF
708
732
EKMPVCSYFLKGICSNSNCPYSHVY
ENSGGOP00000002790
CCCH ZF
735
753
RKAEVCSDFLKGYCPLGAK
Links
Other
CCCH ZF
family RBPs
Other
Gorilla gorilla
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H3
Otolemur garnettii
ENSOGAG00000014907
N
0.859
XP_001202203.1
Strongylocentrotus purpuratus
XP_001202203.1
N
0.704
XP_001187951.1
Strongylocentrotus purpuratus
XP_001187951.1
N
0.704