CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Glyma20g10260.1
(
Glycine max
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Glyma20g10260.1
T52947_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Glyma20g10260.1
RRM
230
295
LYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLK
Links
Other
RRM
family RBPs
Other
Glycine max
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R010574
Ailuropoda melanoleuca
Ame_R010574
N
0.000
LARP6
Anolis carolinensis
ENSACAG00000008613
N
0.000
LARP6
Cavia porcellus
ENSCPOG00000022687
N
0.000
LARP6
Choloepus hoffmanni
ENSCHOG00000003318
N
0.000
larp6
Danio rerio
ENSDARG00000005355
N
0.000
zgc:162969
Danio rerio
ENSDARG00000003968
N
0.000
Larp6
Dipodomys ordii
ENSDORG00000012663
N
0.000
LARP6
Echinops telfairi
ENSETEG00000020390
N
0.000
LARP6
Felis catus
ENSFCAG00000001361
N
0.000
LARP6
Gallus gallus
ENSGALG00000004046
N
0.000
LOC420093
Gallus gallus
ENSGALG00000024381
N
0.000
LARP6
Gasterosteus aculeatus
ENSGACG00000014622
N
0.000
LARP6
Loxodonta africana
ENSLAFG00000016343
N
0.000
LARP6
Macropus eugenii
ENSMEUG00000002270
N
0.000
LARP6
Meleagris gallopavo
ENSMGAG00000005077
N
0.000
LARP6
Monodelphis domestica
ENSMODG00000009034
N
0.000
Larp6
Mus musculus
ENSMUSG00000034839
N
0.000
ENSOPRG00000004868
Ochotona princeps
ENSOPRG00000004868
N
0.000
LARP6
Oryctolagus cuniculus
ENSOCUG00000009306
N
0.000
LARP6
Oryzias latipes
ENSORLG00000014256
N
0.000
LARP6
Procavia capensis
ENSPCAG00000014197
N
0.000
Larp6
Rattus norvegicus
ENSRNOG00000012438
N
0.000
LARP6
Taeniopygia guttata
ENSTGUG00000005808
N
0.000
LARP6
Takifugu rubripes
ENSTRUG00000003151
N
0.000