CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP6
(
Anolis carolinensis
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSACAG00000008613
T22684_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000008410
La
26
85
LVAQIEYYFSDENLEKDAFLLKHVRRNKMGYVSVKLLTSFKKVKHLTRDWRTTSHALKYS
Links
Other
La
family RBPs
Other
Anolis carolinensis
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP6
Gallus gallus
ENSGALG00000004046
N
0.983
LARP6
Meleagris gallopavo
ENSMGAG00000005077
N
0.967
LARP6
Taeniopygia guttata
ENSTGUG00000005808
N
0.950
LARP6
Choloepus hoffmanni
ENSCHOG00000003318
N
0.933
Larp6
Mus musculus
ENSMUSG00000034839
N
0.933
Larp6
Rattus norvegicus
ENSRNOG00000012438
N
0.933
Ame_R010574
Ailuropoda melanoleuca
Ame_R010574
N
0.933
LARP6
Macropus eugenii
ENSMEUG00000002270
N
0.917
LARP6
Procavia capensis
ENSPCAG00000014197
N
0.917
LARP6
Loxodonta africana
ENSLAFG00000016343
N
0.917
LARP6
Monodelphis domestica
ENSMODG00000009034
N
0.917
LARP6
Cavia porcellus
ENSCPOG00000022687
N
0.917
LARP6
Echinops telfairi
ENSETEG00000020390
N
0.900
LARP6
Oryzias latipes
ENSORLG00000014256
N
0.883
Larp6
Dipodomys ordii
ENSDORG00000012663
N
0.883
LARP6
Takifugu rubripes
ENSTRUG00000003151
N
0.867
LARP6
Gasterosteus aculeatus
ENSGACG00000014622
N
0.867
larp6
Danio rerio
ENSDARG00000005355
N
0.867
ENSOPRG00000004868
Ochotona princeps
ENSOPRG00000004868
N
0.850
LARP6
Oryctolagus cuniculus
ENSOCUG00000009306
N
0.850
LARP6
Tetraodon nigroviridis
ENSTNIG00000011926
N
0.850
LARP6
Felis catus
ENSFCAG00000001361
N
0.783
LOC420093
Gallus gallus
ENSGALG00000024381
N
0.717
SNAPOd2T00012503001
Oikopleura dioica
SNAPOd2T00012503001
N
0.705
amel4_ncbi_hmm2546
Apis mellifera
amel4_ncbi_hmm2546
N
0.700
zgc:162969
Danio rerio
ENSDARG00000003968
N
0.700
BGIBMGA013975
Bombyx mori
BGIBMGA013975
N
0.700