gw1.11.630.1 (Trichoderma virens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.11.630.1 T53062_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.11.630.1 RRM 29 101

Links

Other RRM family RBPs
Other Trichoderma virens RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_01555 Chaetomium globosum CHGG_01555 N 0.822
GLRG_04425 Colletotrichum graminicola GLRG_04425 N 0.795
fgenesh1_pm.C_scaffold_4000211 Cryphonectria parasitica fgenesh1_pm.C_scaffold_4000211 N 0.740
FGSG_11793 Fusarium graminearum FGSG_11793 N 0.784
FOXG_00437 Fusarium oxysporum FOXG_00437 N 0.836
FVEG_01075 Fusarium verticillioides FVEG_01075 N 0.849
MGG_04351 Magnaporthe oryzae MGG_04351 N 0.716
estExt_Genewise1.C_21399 Myceliophthora thermophila estExt_Genewise1.C_21399 N 0.808
fgenesh1_pm.sca_1_chr1_3_0000206 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000206 N 0.890
NCU02780 Neurospora crassa NCU02780 N 0.877
e_gw1.4.1466.1 Neurospora discreta e_gw1.4.1466.1 N 0.877
estExt_fgenesh1_pg.C_120120 Neurospora tetrasperma estExt_fgenesh1_pg.C_120120 N 0.877
Pa_1_7200 Podospora anserina Pa_1_7200 N 0.781
e_gw1.4.2238.1 Thielavia terrestris e_gw1.4.2238.1 N 0.863
e_gw1.14.516.1 Trichoderma atroviride e_gw1.14.516.1 N 0.945
estExt_GeneWisePlus.C_30660 Trichoderma reesei estExt_GeneWisePlus.C_30660 N 0.932
VDAG_03182 Verticillium dahliae VDAG_03182 N 0.822