CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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gw1.14.317.1
(
Chlorella NC64A
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
gw1.14.317.1
T53114_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.14.317.1
RRM
37
107
VYVGNLSFFTTEDQIFEVFSKVGDVKRIVMGLDKHRSTPCGFCFVVYYTREDTEDCVKYVNGTMLDDRPIR
Links
Other
RRM
family RBPs
Other
Chlorella NC64A
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ELAVL1
Cavia porcellus
ENSCPOG00000011884
I
0.000
ENSCHOG00000006810
Choloepus hoffmanni
ENSCHOG00000006810
I
0.000
ELAVL1
Echinops telfairi
ENSETEG00000012985
I
0.000
ELAVL1
Procavia capensis
ENSPCAG00000016012
I
0.000