mgf000685m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf000685m T53573_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf000685m RRM 8 78

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002868851.1 Arabidopsis lyrata fgenesh2_kg.7__133__AT4G39260.1 N 0.803
XM_002880346.1 Arabidopsis lyrata fgenesh2_kg.4__94__AT2G21660.2 N 0.831
CCR2 Arabidopsis thaliana AT2G21660-TAIR-G N 0.803
GR-RBP8 Arabidopsis thaliana AT4G39260-TAIR-G N 0.789
BRADI1G12787 Brachypodium distachyon BRADI1G12787 N 0.803
BRADI4G00940 Brachypodium distachyon BRADI4G00940 N 0.746
Cucsa.109630 Cucumis sativus Cucsa.109630 N 0.732
Glyma06g01470.1 Glycine max Glyma06g01470.1 N 0.803
Glyma11g12480.1 Glycine max Glyma11g12480.1 N 0.817
Glyma11g12490.1 Glycine max Glyma11g12490.1 N 0.789
chr3.CM0091.670.nd Lotus japonicus chr3.CM0091.670.nd N 0.746
chr1.CM0178.490.nc Lotus japonicus chr1.CM0178.490.nc N 0.746
chr3.CM0091.630.nd Lotus japonicus chr3.CM0091.630.nd N 0.718
MDP0000260339 Malus x domestica MDP0000260339 N 0.704
MDP0000797759 Malus x domestica MDP0000797759 N 0.803
cassava22282.valid.m1 Manihot esculenta cassava22282.valid.m1 N 0.704
cassava22279.valid.m1 Manihot esculenta cassava22279.valid.m1 N 0.831
cassava22280.valid.m1 Manihot esculenta cassava22280.valid.m1 N 0.831
cassava22281.valid.m1 Manihot esculenta cassava22281.valid.m1 N 0.831
cassava6967.valid.m1 Manihot esculenta cassava6967.valid.m1 N 0.817
Medtr4g095640 Medicago truncatula Medtr4g095640 N 0.775
Medtr4g095700 Medicago truncatula Medtr4g095700 N 0.775
Medtr4g095740 Medicago truncatula Medtr4g095740 N 0.817
mgf001195m Mimulus guttatus mgf001195m N 1.000
BGIOSIBCE012432 Oryza indica BGIOSIBCE012432 N 0.817
BGIOSIBCE037445 Oryza indica BGIOSIBCE037445 N 0.817
LOC_Os03g46770 Oryza sativa LOC_Os03g46770 N 0.817
LOC_Os12g43600 Oryza sativa LOC_Os12g43600 N 0.831
gw1.136.87.1 Physcomitrella patens gw1.136.87.1 N 0.761
fgenesh1_pg.scaffold_42000167 Physcomitrella patens fgenesh1_pg.scaffold_42000167 N 0.789
gw1.123.70.1 Physcomitrella patens gw1.123.70.1 N 0.789
A9P8S6_POPTR Populus trichocarpa POPTR_0009s11920 N 0.817
A9P8Z7_POPTR Populus trichocarpa POPTR_0004s16260 N 0.831
29633.m000882 Ricinus communis 29633.m000882 N 0.831
GRP2_SORBI Sorghum bicolor Sb01g012300 N 0.746
SB08G022740 Sorghum bicolor Sb08g022740 N 0.789
GSVIVG00031973001 Vitis vinifera GSVIVG00031973001 N 0.873
GRMZM2G165901 Zea mays GRMZM2G165901 N 0.732
GRMZM2G080603 Zea mays GRMZM2G080603 N 0.789