gw1.123.70.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.123.70.1 T53082_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.123.70.1 RRM 4 74

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.scaffold_42000167 Physcomitrella patens fgenesh1_pg.scaffold_42000167 N 0.901
gw1.136.87.1 Physcomitrella patens gw1.136.87.1 N 0.859
mgf001195m Mimulus guttatus mgf001195m N 0.789
mgf000685m Mimulus guttatus mgf000685m N 0.789
GRMZM2G165901 Zea mays GRMZM2G165901 N 0.761
GRP2_SORBI Sorghum bicolor Sb01g012300 N 0.746
BGIOSIBCE012432 Oryza indica BGIOSIBCE012432 N 0.732
LOC_Os12g43600 Oryza sativa LOC_Os12g43600 N 0.732
LOC_Os03g46770 Oryza sativa LOC_Os03g46770 N 0.732
29633.m000882 Ricinus communis 29633.m000882 N 0.718
cassava22279.valid.m1 Manihot esculenta cassava22279.valid.m1 N 0.718
cassava6967.valid.m1 Manihot esculenta cassava6967.valid.m1 N 0.718
Glyma11g12490.1 Glycine max Glyma11g12490.1 N 0.718
Glyma06g01470.1 Glycine max Glyma06g01470.1 N 0.718
cassava22281.valid.m1 Manihot esculenta cassava22281.valid.m1 N 0.718
cassava22280.valid.m1 Manihot esculenta cassava22280.valid.m1 N 0.718
GSVIVG00031973001 Vitis vinifera GSVIVG00031973001 N 0.718
BGIOSIBCE037445 Oryza indica BGIOSIBCE037445 N 0.718
chr1.CM0178.490.nc Lotus japonicus chr1.CM0178.490.nc N 0.718
Medtr4g095640 Medicago truncatula Medtr4g095640 N 0.718
BRADI4G00940 Brachypodium distachyon BRADI4G00940 N 0.718
BRADI1G12787 Brachypodium distachyon BRADI1G12787 N 0.718
XM_002880346.1 Arabidopsis lyrata fgenesh2_kg.4__94__AT2G21660.2 N 0.718
Glyma11g12480.1 Glycine max Glyma11g12480.1 N 0.704
GRMZM2G080603 Zea mays GRMZM2G080603 N 0.704
XM_002868851.1 Arabidopsis lyrata fgenesh2_kg.7__133__AT4G39260.1 N 0.704
Medtr4g095700 Medicago truncatula Medtr4g095700 N 0.704
SB08G022740 Sorghum bicolor Sb08g022740 N 0.704
A9P8Z7_POPTR Populus trichocarpa POPTR_0004s16260 N 0.704