CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AC186319.4_FG002
(
Zea mays
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AC186319.4_FG002
T53976_0.6
MaizeSequence (2009-Oct-16)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AC186319.4_FGP002
RRM
59
104
QLFYFVTFQDRYTQKPRGFGFITFADPTVVDRVIEDEHVINGKPVE
AC186319.4_FGP002
RRM
124
195
IFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLHKKGNMIDLNGSQVE
Links
Other
RRM
family RBPs
Other
Zea mays
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI3G20700
Brachypodium distachyon
BRADI3G20700
N
0.765
BGIOSIBCE027406
Oryza indica
BGIOSIBCE027406
N
0.704
LOC_Os08g23120
Oryza sativa
LOC_Os08g23120
N
0.704
SB03G027920
Sorghum bicolor
Sb03g027920
N
0.732