BGIOSIBCE027406 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE027406 T33044_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE027406 RRM 17 85
BGIOSIBCE027406 RRM 105 176

Links

Other RRM family RBPs
Other Oryza indica RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 1.000
SB03G027920 Sorghum bicolor Sb03g027920 N 0.915
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.872
PDK_20s1371981g001 Phoenix dactylifera PDK_20s1371981g001 N 0.764
MDP0000220851 Malus x domestica MDP0000220851 N 0.759
MDP0000202850 Malus x domestica MDP0000202850 N 0.759
ppa006963m Prunus persica ppa006963m N 0.759
MDP0000191633 Malus x domestica MDP0000191633 N 0.759
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.745
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.745
PK22392.1 Cannabis sativa PK22392.1 N 0.738
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.730
29629.m001425 Ricinus communis 29629.m001425 N 0.730
ppa007812m Prunus persica ppa007812m N 0.730
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.730
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.730
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.730
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.723
mgf019396m Mimulus guttatus mgf019396m N 0.723
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.723
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.723
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.716
MDP0000908645 Malus x domestica MDP0000908645 N 0.716
MDP0000288646 Malus x domestica MDP0000288646 N 0.716
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.716
AC186319.4_FG002 Zea mays AC186319.4_FG002 N 0.704
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.702