CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.00866.790.1
(
Aspergillus carbonarius
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
e_gw1.00866.790.1
T56080_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.00866.790.1
RRM
1
69
ISGLAWHTTDETLRQGFSEFGAIEEAIVVKDHDTNRSRGFGFVRFANPEDADTAAQAMNNQEFDGRVIR
Links
Other
RRM
family RBPs
Other
Aspergillus carbonarius
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_03747
Arthroderma benhamiae
ARB_03747
N
0.707
ACLA_036560
Aspergillus clavatus
CADACLAG00003885
N
0.746
AFLA_086540
Aspergillus flavus
CADAFLAG00001433
N
0.718
AFUA_3G08580
Aspergillus fumigatus
CADAFUAG00005852
N
0.718
ANIA_02989
Aspergillus nidulans
CADANIAG00010091
N
0.732
An02g12270
Aspergillus niger
CADANGAG00002750
N
0.789
AO090005001419
Aspergillus oryzae
CADAORAG00003299
N
0.718
BDBG_01954
Blastomyces dermatitidis
BDBG_01954
N
0.761
CIMG_07653
Coccidioides immitis
CIMG_07653
N
0.775
CPSG_09452
Coccidioides posadasii
CPSG_09452
N
0.775
MCYG_06115
Microsporum canis
MCYG_06115
N
0.789
MGYG_01973
Microsporum gypseum
MGYG_01973
N
0.775
NFIA_068550
Neosartorya fischeri
CADNFIAG00006348
N
0.718
PABG_01590
Paracoccidioides brasiliensis
PABG_01590
N
0.732
Pc20g03510
Penicillium chrysogenum
Pc20g03510
N
0.725
PMAA_013050
Penicillium marneffei
PMAA_013050
N
0.718
SNOG_04431
Stagonospora nodorum
SNOG_04431
N
0.718
TERG_04706
Trichophyton rubrum
TERG_04706
N
0.775
TESG_06069
Trichophyton tonsurans
TESG_06069
N
0.775
UREG_07630
Uncinocarpus reesii
UREG_07630
N
0.761